I think that it would be nice if there was an option where you can set the tiebreaker to whoever has the best roto score on the overall stats on the season. This way the player with the best season has the advantage. The best seed in a head to head league is not always the best team, he could have had luck with the schedule and faced another team when they had less players playing etc. The same can be said with the record versus your opponent, he could have just had some luck with the schedule.

So the way it works is that if you came in first in points (and there are 12 teams in the league), then you get 12 points for the points category. If you came in last in points, then you get 1 point. If you came in first in rebounds, then you get 12 points, etc etc and add up all the points on the season for each category.